2016 published
Singly Flagellated Pseudomonas aeruginosa Chemotaxes Efficiently by Unbiased Motor Regulation.
Qiuxian Cai,Zhaojun Li,Qi Ouyang,Chunxiong Luo,Vernita D. Gordon.
mBio. 2016;7:e00013-e00013. [Html]
Distinct signaling of Drosophila chemoreceptors in olfactory sensory neurons.
Li-Hui Cao,Bi-Yang Jing,Dong Yang,Xiankun Zeng,Ying Shen,Yuhai Tu,Dong-Gen Luo.
Proceedings of the National Academy of Sciences of the United States of America. 2016;113:E902-E911. [Html]
Thermodynamics and kinetics of TopoII action: A consensus on T-segment curvature selection? Comment on "Disentangling DNA Molecules" by Alexander Vologodskii.
Chan H S, Liu Z.
Phys Life Rev. 2016;18:135-138. [Html]
Designed inhibitor for nuclear localization signal of polo-like kinase 1 induces mitotic arrest.
Chen F, Zhuo X, Qin T, et al.
Chem Biol Drug Des. 2016. [Html]
Cab45S promotes cell proliferation through SERCA2b inhibition and Ca2+ signaling.
Chen L, Xu S, Xu Y, et al.
Oncogene. 2016;35:35-46. [Html]
Structural basis for dynamic regulation of the human 26S proteasome.
Shuobing Chen,Jiayi Wu,Ying Lu,Yong-Bei Ma,Byung-Hoon Lee,Zhou Yu,Qi Ouyang,Daniel J. Finley,Marc W. Kirschner,Youdong Mao.
Proceedings of the National Academy of Sciences of the United States of America. 2016;113:12991-12996. [Html]
Relationship between cancer mutations and parameter sensitivity in Rb pathway.
Chen X, Chen J, Shao B, et al.
J Theor Biol. 2016;404:120-125. [Html]
A Flux Balance of Glucose Metabolism Clarifies the Requirements of the Warburg Effect.
Dai Z, Shestov A A, Lai L, et al.
Biophysical Journal. 2016;111:1088-1100. [Html]
Indel variant analysis of short-read sequencing data with Scalpel.
Han Fang,Ewa A Bergmann,Kanika Arora,Vladimir Vacic,Michael C Zody,Ivan Iossifov,Jason A O'Rawe,Yiyang Wu,Laura T Jimenez Barron,Julie Rosenbaum,Michael Ronemus,Yoon-ha Lee,Zihua Wang,Esra Dikoglu,Vaidehi Jobanputra,Gholson J Lyon,Michael Wigler,Michael C Schatz,Giuseppe Narzisi.
Nature protocols. 2016;11:2529-2548. [Html]
Identifying micro-inversions using high-throughput sequencing reads.
Feifei He,Yang Li,Yu-Hang Tang,Jian Ma,Huaiqiu Zhu.
BMC Genomics. 2016;17 Suppl 1:4. [Html]
Conformational Flexibility of a Short Loop near the Active Site of the SARS-3CLpro is Essential to Maintain Catalytic Activity.
Chunmei Li,XinTeng,Yifei Qi,Bo Tang,Hailing Shi,Xiaomin Ma,Luhua Lai.
Sci Rep. 2016;6:20918. [Html]
Dimensions, energetics, and denaturant effects of the protein unstructured state.
Maodong Li,Zhirong Liu.
Protein Science. 2016;25:734-747. [Html]
Dimension conversion and scaling of disordered protein chains.
Maodong Li,Tanlin Sun,Fan Jin,Daqi Yu,Zhirong Liu.
Molecular Biosystems. 2016;12:2932-2940. [Html]
Novel Inhibitors of Toxin HipA Reduce Multidrug Tolerant Persisters.
Tongqing Li,Ning Yin,Hongbo Liu,Jianfeng Pei,Luhua Lai.
Acs Medicinal Chemistry Letters. 2016;7:449-453. [Html]
Engineering of core promoter regions enables the construction of constitutive and inducible promoters in Halomonas sp.
Li T T, Li T T, Ji W, et al.
Biotechnology Journal. 2016;11:219-227. [Html]
Herb-target interaction network analysis helps to disclose molecular mechanism of traditional Chinese medicine.
Hao Liang,Hao Ruan,Qi Ouyang,Luhua Lai.
Sci Rep. 2016;6:36767. [Html]
Similar Fecal Microbiota Signatures in Patients With Diarrhea-Predominant Irritable Bowel Syndrome and Patients With Depression.
Yixuan Liu,Lu Zhang,Xiaoqi Wang,Zhe Wang,Jingjing Zhang,Ronghuan Jiang,Xiangqun Wang,Kun Wang,Zuojing Liu,Zhiwei Xia,Zhijie Xu,Yong Nie,Xianglin Lv,Xiaolei Wu,Huaiqiu Zhu,Liping Duan.
Clin Gastroenterol Hepatol. 2016;14:1602-1611 e1605. [Html]
Molecular basis of caspase-1 polymerization and its inhibition by a new capping mechanism.
Alvin Lu,Yang Li,Florian I Schmidt,Qian Yin,Shuobing Chen,Tian-Min Fu,Alexander B Tong,Hidde L Ploegh,Youdong Mao,Hao Wu.
Nat Struct Mol Biol. 2016;23:416-425. [Html]
Motions of Allosteric and Orthosteric Ligand-Binding Sites in Proteins are Highly Correlated.
Xiaomin Ma,Hu Meng,Luhua Lai.
Journal of Chemical Information and Modeling. 2016;56:1725-1733. [Html]
A microscopic landscape of the invasive breast cancer genome.
Zheng Ping,Yuchao Xia,Tiansheng Shen,Vishwas Parekh,Gene P. Siegal,IsamEldinEltoum,Jianbo He,Dongquan Chen, Minghua Deng, Ruibin Xi,Dejun Shen.
Sci Rep. 2016;6:27545. [Html]
Discovery of Novel Polo-Like Kinase 1 Polo-Box Domain Inhibitors to Induce Mitotic Arrest in Tumor Cells.
Tan Qin,Fangjin Chen,Xiaolong Zhuo,Xiao Guo,Taikangxiang Yun,Ying Liu,Chuanmao Zhang,Luhua Lai.
J Med Chem. 2016;59:7089-7096. [Html]
A parallel and quantitative cell migration assay using a novel multi-well-based device.
Quan Q, Zhang S, Wang X, et al.
Biomed Microdevices. 2016;18:99. [Html]
The transcriptional repressor Hes1 attenuates inflammation by regulating transcription elongation.
Yingli Shang,Maddalena Coppo,Teng He,Fei Ning,Li Yu,Lan Kang,Bin Zhang,Chanyang Ju,Yu Qiao,Baohong Zhao,Manfred Gessler,Inez Rogatsky,Xiaoyu Hu.
Nat Immunol. 2016;17:930-937. [Html]
Long-term dual-color tracking of genomic loci by modified sgRNAs of the CRISPR/Cas9 system.
Shipeng Shao,Weiwei Zhang,Huan Hu,Boxin Xue,Jinshan Qin,Chaoying Sun,Yuao Sun,Wensheng Wei,Yujie Sun.
Nucleic Acids Res. 2016;44:e86. [Html]
Study of invasion and colonization of E.
Sun X, Wang S, Yang Y, et al.
faecalis in microtubes by a novel device. Biomed Microdevices. 2016;18:82. [Html]
Contributions of Sequence to the Higher-Order Structures of DNA.
Todolli S, Perez P J, Clauvelin N, et al.
Biophys J. 2016. [Html]
Graded, Dynamically Routable Information Processing with Synfire-Gated Synfire Chains.
Zhuo Wang,Andrew T. Sornborger,Louis Tao.
PLoS Comput Biol. 2016;12:e1004979. [Html]
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Using Sub-Network Combinations to Scale Up an Enumeration Method for Determining the Network Structures of Biological Functions.
J. Y. Xi,Q. Ouyang.
PLoS One. 2016;11:e0168214. [Html]
Adaptation through proportion.
Xiong L, Shi W, Tang C.
Physical biology. 2016;13:46007. [Html]
Unsupervised Cryo-EM Data Clustering through Adaptively Constrained K-Means Algorithm.
Yaofang Xu,Jiayi Wu,Chang-Cheng Yin,Youdong Mao.
PLoS One. 2016;11:e0167765. [Html]
Structure-based Inhibitor Design for the Intrinsically Disordered Protein c-Myc.
ChenYu,Xiaogang Niu,Fan Jin,Zhirong Liu,Changwen Jin,Luhua Lai.
Sci Rep. 2016;6:22298. [Html]
A network based covariance test for detecting multivariate eQTL in saccharomyces cerevisiae.
Huili Yuan,Zhenye Li,Nelson L. S. Tang,Minghua Deng.
BMC Syst Biol. 2016;10 Suppl 1:8. [Html]
Discovery of Non-ATP-Competitive Inhibitors of Polo-like Kinase 1.
Taikangxiang Yun,Tan Qin,Ying Liu,Luhua Lai.
ChemMedChem. 2016;11:713-717. [Html]
Identification of acylthiourea derivatives as potent Plk1 PBD inhibitors.
Yun T, Qin T, Liu Y, et al.
European Journal of Medicinal Chemistry. 2016;124:229-236. [Html]
Improving residue-residue contact prediction via low-rank and sparse decomposition of residue correlation matrix.
Zhang H, Gao Y, Deng M, et al.
Biochem Biophys Res Commun. 2016;472:217-222. [Html]
Estimating net primary production of natural grassland and its spatio-temporal distribution in China.
Zhang M, Lal R, Zhao Y, et al.
Science of the Total Environment. 2016;553:184-195. [Html]
Gel integration for microfluidic applications.
Xuanqi Zhang,Lingjun Li,Chunxiong Luo.
Lab on a Chip. 2016;16:1757-1776. [Html]
Engineering Escherichia coli to bind to cyanobacteria.
Zhang Z, Meng L, Ni C, et al.
J Biosci Bioeng. 2016. [Html]
Novel T7-like expression systems used for Halomonas.
Zhao H, Zhang H M, Chen X, et al.
Metab Eng. 2016. [Html]
Cep57 is a Mis12-interacting kinetochore protein involved in kinetochore targeting of Mad1-Mad2.
Haining Zhou,Tianning Wang,Tao Zheng,Junlin Teng,Jianguo Chen.
Nat Commun. 2016;7:10151. [Html]
Rational design of TNFalpha binding proteins based on the de novo designed protein DS119.
Zhu C, Zhang C, Zhang T, et al.
Protein Sci. 2016;25:2066-2075. [Html]
Interplay between binding affinity and kinetics in protein-protein interactions.
Huaiqing Cao,Yongqi Huang,Zhirong Liu.
Proteins. 2016;84:920-933. [Html]
