2008 published



Conservation and implications of eukaryote transcriptional regulatory regions across multiple species.

Wan, L; Li, DY; Zhang, DL; et al.

BMC GENOMICS, 9: Art. No. 623 DEC 20 2008. [PubMed]



c-REDUCE: Incorporating sequence conservation to detect motifs that correlate with expression.

Kechris, K; Li, H.

BMC BIOINFORMATICS, 9: Art. No. 506 NOV 28 2008. [PubMed]



Discovery of Multitarget Inhibitors by Combining Molecular Docking with Common Pharmacophore Matching.

Wei, DG; Jiang, XL; Zhou, L; et al.

JOURNAL OF MEDICINAL CHEMISTRY, 51 (24): 7882-7888 DEC 25 2008. [PubMed]



Reversibly switchable DNA nanocompartment on surfaces: experiments.

Mao, YD; Luo, CX; Ou-Yang, Q.

applications, and theory. FRONTIERS OF PHYSICS IN CHINA, 3 (1): 74-87 FEB 2008. [PubMed]



New Solutions of Translation Initiation Site Prediction for Prokaryotic Genomes.

Hu, GQ; Liu, YC; Meng, XB; et al.

PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 35 (11): 1254-1262 NOV 2008. [PubMed]



Finding multiple target optimal intervention in disease-related molecular network.

Yang, K; Bai, HJ; Qi, OY; et al.

MOLECULAR SYSTEMS BIOLOGY, 4: Art. No. 228 NOV 2008. [PubMed]



Fluence-Response Dynamics of the UV-Induced SOS Response in Escherichia coli.

Ni, M; Yang, L; Liu, XL; et al.

CURRENT MICROBIOLOGY, 57 (6): 521-526 DEC 2008. [PubMed]



A molecular model for persister in E.

Lou, CB; Li, ZZ; Qi, OY.

coli. JOURNAL OF THEORETICAL BIOLOGY, 255 (2): 205-209 NOV 21 2008. [PubMed]



Activation and inhibition of leukotriene A(4) hydrolase aminopeptidase activity by diphenyl ether and derivatives.

Jiang, XL; Zhou, L; Wei, DG; et al.

BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 18 (24): 6549-6552 DEC 15 2008. [PubMed]



A new method for splice site prediction based on the sequence patterns of splicing signals and regulatory elements.

Sun, ZX; Sang, LJ; Ju, LN; et al.

CHINESE SCIENCE BULLETIN, 53 (21): 3331-3340 NOV 2008. [PubMed]



A fast cell loading and high-throughput microfluidic system for long-term cell culture in zero-flow environments.

Luo, CX; Zhu, XJ; Yu, T; et al.

BIOTECHNOLOGY AND BIOENGINEERING, 101 (1): 190-195 SEP 1 2008. [PubMed]



Key residue-dominated protein folding dynamics.

Yao, XQ; She, ZS.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 373 (1): 64-68 AUG 15 2008. [PubMed]



Modelling the SOS response by semi-stochastic simulation.

Ni, M; Wang, SY; Ouyang, Q.

CHINESE PHYSICS LETTERS, 25 (7): 2702-2705 JUL 2008. [PubMed]



Control of scroll wave turbulence in a three-dimensional reaction-diffusion system with gradient.

Qiao, C; Wu, YB; Lu, XC; et al.

CHAOS, 18 (2): Art. No. 026109 JUN 2008. [PubMed]



SCUMBLE: a method for systematic and accurate detection of codon usage bias by maximum likelihood estimation.

Kloster, M; Tang, C.

NUCLEIC ACIDS RESEARCH, 36 (11): 3819-3827 JUN 2008. [PubMed]



Robust.

Tsai, TYC; Choi, YS; Ma, WZ; et al.

tunable biological oscillations from interlinked positive and negative feedback loops. SCIENCE, 321 (5885): 126-129 JUL 4 2008. [PubMed]



Chemically induced dimerization of human nonpancreatic secretory phospholipase A2 by bis-indole derivatives.

Zhou, L; Fang, C; Wei, P; et al.

JOURNAL OF MEDICINAL CHEMISTRY, 51 (12): 3360-3366 JUN 26 2008. [PubMed]



Inward propagating chemical waves in a single-phase reaction-diffusion system.

Shao, X; Wu, YB; Zhang, JZ; et al.

PHYSICAL REVIEW LETTERS, 100 (19): Art. No. 198304 MAY 16 2008. [PubMed]



Computational evaluation of TIS annotation for prokaryotic genomes.

Hu, GQ; Zheng, XB; Ju, LN; et al.

BMC BIOINFORMATICS, 9: Art. No. 160 MAR 25 2008. [PubMed]



FAAP.

Hu, JS; Teng, JL; Ding, NZ; et al.

a novel murine protein, is involved in cell adhesion through regulating vinculin-paxillin association. FRONTIERS IN BIOSCIENCE, 13: 7123-7131 MAY 2008. [PubMed]



Stochastic simulation of Turing patterns.

Fu, ZP; Xu, XH; Wang, HL; et al.

CHINESE PHYSICS LETTERS, 25 (4): 1220-1223 APR 2008. [PubMed]



Control of spiral turbulence by periodic forcing in a reaction-diffusion system with gradients.

Wu, YB; Qiao, C; Qi, OY; et al.

PHYSICAL REVIEW E, 77 (3): Art. No. 036226 Part 2 MAR 2008. [PubMed]



Effect of noise on chemical waves in three-dimensional reaction-diffusion systems with gradient.

Lu, XC; Wang, CY; Qiao, C; et al.

JOURNAL OF CHEMICAL PHYSICS, 128 (11): Art. No. 114505 MAR 21 2008. [PubMed]



A dynamic Bayesian network approach to protein secondary structure prediction.

Yao, XQ; Zhu, HQ; She, ZS.

BMC BIOINFORMATICS, 9: Art. No. 49 JAN 25 2008. [PubMed]



Dynamic property is a key determinant for protein-protein interactions.

Bai, HJ; Ma, WZ; Liu, SY; et al.

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 70 (4): 1323-1331 MAR 2008. [PubMed]



Local wave grouping in a parameter-gradient system and its formation mechanism.

Liao, HM; Wu, YL; Yu, JL; et al.

PHYSICAL REVIEW E, 77 (1): Art. No. 016206 Part 2 JAN 2008. [PubMed]



Secondary structural analysis of the mRNA regions encoding the hemagglutinin cleavage site basic amino acids of the avian influenza virus H5N1 subtype samples.

Zhang, SX; Wang, X; Chen, XF; et al.

CHINESE SCIENCE BULLETIN, 53 (3): 377-383 FEB 2008. [PubMed]



ProTISA: a comprehensive resource for translation initiation site annotation in prokaryotic genomes.

Hu, GQ; Zheng, XB; Yang, YF; et al.

NUCLEIC ACIDS RESEARCH, 36: D114-D119 Sp. Iss. SI JAN 2008. [PubMed]